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Identification of Oyster Genes Differentially Expressed After Exposure to Mercury Using Microarray Technology

 
In this project, we propose to develop microarray technoloy for monitoring of biological impact of environmental pollution. Oyster cDNA microtechnology will be developed for study of genomic expression signatures (GES) in response to environmental agents to identify genees affected by mercury, under both acute and more subtle, long-term exposures. Biological effects of mercury on survival, growth, and reproduction will be studied in relation to the genomic expression signatures.

cDNA microarrays will be developed by using normalized and subtracted cDNA clones. The microarrays will be comparatively hybridized to probes developed from samples before and after treatment of mercury. Pollutant-specific genomic expression signatures will be identified, characterized, and developed into genechips as highly sensitive and reliable tools for monitoring of biological impact of environmental pollution. The cDNA microarrays will provide advanced technological tools for study of other environmental stresses by changing the treatment compound and offer highly sensitive and reliable indicators for monitoring marine environment. The project outputs include normalized cDNA libraries made from oysters with all mRNAs being "equally" represented; genechips containing large numbers of expressed sequence tag clones representing a large part of the genomic expression; identified genes induced by exposure to mercury. These are marine biotechnological reagents needed to address marine environmental problems using biotechnology, and can be applicable to address any other environmental problem. A significant part of the output will be the advances in marine environmental science and coastal ecosystem health assessment through use of genechip technology. Pollutant-specific and dose-dependent promoters can be isolated in the near future from the affected genes, which will be the basis for studies of in situ bioindication. Long-term benefits relate to the development of a new generation of technologies based on environmental genomics.


Principal Investigator(s) or Program Chair:
Liu, Zhanjiang

Sponsor(s):
Sea Grant Mississippi-Alabama

Institution(s):
Auburn University

Field of Focus:
Oyster gene identification following mercury exposure

Study Site:   Mississippi Sound

Award Period:   2001 - 2004

E-mail:   zliu@acesag.auburn.edu

Keywords:   Oyster, Gene, Identification, Mercury, Microarray, cDNA, Microtechnology, GES


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